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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6925703 chr6:26521589 G/A ZNF322B chr9:99957633-99961910:- 0.54 10.3 1.35E-22 Box Plot
THCA rs6925783 chr6:26570410 T/C ZNF322B chr9:99957633-99961910:- 0.59 11.32 1.79E-26 Box Plot
THCA rs6925895 chr6:26572165 G/T ZNF322B chr9:99957633-99961910:- 0.59 11.32 1.79E-26 Box Plot
THCA rs6925898 chr6:151738854 A/G NEK5 chr13:52607747-52703214:- 0.61 7.14 3.4E-12 Box Plot
THCA rs6926629 chr6:26499903 T/C ZNF322B chr9:99957633-99961910:- 0.54 10.2 3.09E-22 Box Plot
THCA rs6926931 chr6:26587908 T/A ZNF322B chr9:99957633-99961910:- 0.6 8.99 5.79E-18 Box Plot
THCA rs6929908 chr6:26555289 C/A ZNF322B chr9:99957633-99961910:- 0.6 8.64 8.24E-17 Box Plot
THCA rs6930120 chr6:26555484 A/G ZNF322B chr9:99957633-99961910:- 0.57 11.04 2.09E-25 Box Plot
THCA rs693082 chr5:50104371 A/G LOC647121 chr1:121260910-121313686:+ 0.33 6.37 4.4E-10 Box Plot
THCA rs6931849 chr6:26603417 A/G ZNF322B chr9:99957633-99961910:- 0.74 15.4 9.72E-44 Box Plot
THCA rs6932109 chr6:28078303 A/G BTN3A2 chr6:26365387-26378548:+ 0.28 5.96 4.89E-9 Box Plot
THCA rs6932156 chr6:26571506 T/G ZNF322B chr9:99957633-99961910:- 0.59 11.32 1.79E-26 Box Plot
THCA rs6932350 chr6:26571629 T/A ZNF322B chr9:99957633-99961910:- 0.55 10.39 6.05E-23 Box Plot
THCA rs6932865 chr6:26540166 C/A ZNF322B chr9:99957633-99961910:- 0.54 10.32 1.12E-22 Box Plot
THCA rs6933176 chr6:26540178 G/A ZNF322B chr9:99957633-99961910:- 0.54 10.32 1.12E-22 Box Plot